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PBD: Protracted Birth-Death Model of Diversification

Conducts maximum likelihood analysis and simulation of the protracted birth-death model of diversification. See Etienne, R.S. & J. Rosindell 2012 <doi:10.1093/sysbio/syr091>; Lambert, A., H. Morlon & R.S. Etienne 2014, <doi:10.1007/s00285-014-0767-x>; Etienne, R.S., H. Morlon & A. Lambert 2014, <doi:10.1111/evo.12433>.

Version: 1.4
Depends: R (≥ 3.0)
Imports: deSolve, ade4, ape, DDD, phytools, graphics, stats, utils
Suggests: knitr, rmarkdown
Published: 2017-05-04
DOI: 10.32614/CRAN.package.PBD
Author: Rampal S. Etienne
Maintainer: Rampal S. Etienne <r.s.etienne at rug.nl>
License: GPL-2
NeedsCompilation: no
In views: Phylogenetics
CRAN checks: PBD results

Documentation:

Reference manual: PBD.pdf
Vignettes: pbd_ML demo

Downloads:

Package source: PBD_1.4.tar.gz
Windows binaries: r-devel: PBD_1.4.zip, r-release: PBD_1.4.zip, r-oldrel: PBD_1.4.zip
macOS binaries: r-release (arm64): PBD_1.4.tgz, r-oldrel (arm64): PBD_1.4.tgz, r-release (x86_64): PBD_1.4.tgz, r-oldrel (x86_64): PBD_1.4.tgz
Old sources: PBD archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=PBD to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.