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A collection of tools to explore the phylogenetic signal in univariate and multivariate data. The package provides functions to plot traits data against a phylogenetic tree, different measures and tests for the phylogenetic signal, methods to describe where the signal is located and a phylogenetic clustering method.
| Version: | 1.3.1 |
| Imports: | Rcpp (≥ 0.11.0), adephylo, igraph, ape, phylobase, boot, DBI, graphics, grDevices, methods, stats, utils |
| LinkingTo: | Rcpp, RcppArmadillo |
| Suggests: | testthat, knitr, rmarkdown |
| Published: | 2023-10-12 |
| DOI: | 10.32614/CRAN.package.phylosignal |
| Author: | Francois Keck |
| Maintainer: | Francois Keck <francois.keck at gmail.com> |
| License: | GPL-3 |
| NeedsCompilation: | yes |
| Citation: | phylosignal citation info |
| Materials: | README |
| In views: | Phylogenetics |
| CRAN checks: | phylosignal results |
| Reference manual: | phylosignal.pdf |
| Vignettes: |
Package overview Plotting functions |
| Package source: | phylosignal_1.3.1.tar.gz |
| Windows binaries: | r-devel: phylosignal_1.3.1.zip, r-release: phylosignal_1.3.1.zip, r-oldrel: phylosignal_1.3.1.zip |
| macOS binaries: | r-release (arm64): phylosignal_1.3.1.tgz, r-oldrel (arm64): phylosignal_1.3.1.tgz, r-release (x86_64): phylosignal_1.3.1.tgz, r-oldrel (x86_64): phylosignal_1.3.1.tgz |
| Old sources: | phylosignal archive |
| Reverse suggests: | ecostats, phylosem |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.