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An elegant tool for processing and visualizing lipidomics data generated by mass spectrometry. 'LipidomicsR' simplifies channel and replicate handling while providing thorough lipid species annotation. Its visualization capabilities encompass principal components analysis plots, heatmaps, volcano plots, and radar plots, enabling concise data summarization and quality assessment. Additionally, it can generate bar plots and line plots to visualize the abundance of each lipid species.
| Version: | 0.3.6 |
| Depends: | tidyverse |
| Imports: | broom, car, ggiraph, rcompanion, tidyr, cowplot, dplyr, fmsb, ggplot2, ggplotify, ggrepel, pheatmap, RColorBrewer, reshape2, scales, stringr, tidyselect, ggforce, ggsci |
| Published: | 2024-04-22 |
| DOI: | 10.32614/CRAN.package.LipidomicsR |
| Author: | Mingshi Li [aut, com], Hengyu Zhu [aut, cre] |
| Maintainer: | Hengyu Zhu <hengyu.21 at intl.zju.edu.cn> |
| BugReports: | https://github.com/mingshi1/LipidomicsR/issues |
| License: | MIT + file LICENSE |
| URL: | https://github.com/mingshi1/LipidomicsR |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | LipidomicsR results |
| Reference manual: | LipidomicsR.pdf |
| Package source: | LipidomicsR_0.3.6.tar.gz |
| Windows binaries: | r-devel: LipidomicsR_0.3.6.zip, r-release: LipidomicsR_0.3.6.zip, r-oldrel: LipidomicsR_0.3.6.zip |
| macOS binaries: | r-release (arm64): LipidomicsR_0.3.6.tgz, r-oldrel (arm64): LipidomicsR_0.3.6.tgz, r-release (x86_64): LipidomicsR_0.3.6.tgz, r-oldrel (x86_64): LipidomicsR_0.3.6.tgz |
| Old sources: | LipidomicsR archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.