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Perform gene set enrichment analyses using the Gene set Ordinal Association Test (GOAT) algorithm and visualize your results. Koopmans, F. (2024) <doi:10.1101/2023.12.10.570979>.
Version: | 1.0 |
Depends: | R (≥ 4.1.0), dplyr (≥ 1.0.3) |
Imports: | tibble (≥ 3.0.0), tidyselect (≥ 1.2.0), tidyr (≥ 1.1.2), data.table (≥ 1.14.0), Matrix (≥ 1.4-0), readxl (≥ 1.4.1), writexl (≥ 1.4.1), Rcpp (≥ 1.0.9), vctrs (≥ 0.3.8), MonoPoly (≥ 0.3-10), ggplot2 (≥ 3.3.0), pheatmap (≥ 1.0.8), treemap (≥ 2.4), igraph (≥ 1.2.5), ggraph (≥ 2.0.0) |
LinkingTo: | Rcpp |
Suggests: | AnnotationDbi, GO.db, org.Hs.eg.db, fgsea, testthat (≥ 3.0.0) |
Published: | 2024-04-30 |
DOI: | 10.32614/CRAN.package.goat |
Author: | Frank Koopmans |
Maintainer: | Frank Koopmans <ftwkoopmans at gmail.com> |
License: | Apache License (≥ 2) |
URL: | https://github.com/ftwkoopmans/goat/ |
NeedsCompilation: | yes |
Language: | en-US |
Citation: | goat citation info |
Materials: | README NEWS |
CRAN checks: | goat results |
Reference manual: | goat.pdf |
Package source: | goat_1.0.tar.gz |
Windows binaries: | r-devel: goat_1.0.zip, r-release: goat_1.0.zip, r-oldrel: goat_1.0.zip |
macOS binaries: | r-release (arm64): goat_1.0.tgz, r-oldrel (arm64): goat_1.0.tgz, r-release (x86_64): goat_1.0.tgz, r-oldrel (x86_64): goat_1.0.tgz |
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