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DNA copy number data evaluation using both their initial form (copy number as a noisy function of genomic position) and their approximation by a piecewise-constant function (segmentation), for the purpose of identifying genomic regions where the copy number differs from the norm.
| Version: | 2.2 |
| Depends: | R (≥ 2.10), parallel, mclust, rlecuyer, stats |
| Published: | 2022-05-24 |
| DOI: | 10.32614/CRAN.package.CNprep |
| Author: | Alex Krasnitz, Guoli Sun |
| Maintainer: | Guoli Sun <guolisun87 at gmail.com> |
| License: | GPL-2 |
| NeedsCompilation: | no |
| CRAN checks: | CNprep results |
| Reference manual: | CNprep.pdf |
| Package source: | CNprep_2.2.tar.gz |
| Windows binaries: | r-devel: CNprep_2.2.zip, r-release: CNprep_2.2.zip, r-oldrel: CNprep_2.2.zip |
| macOS binaries: | r-release (arm64): CNprep_2.2.tgz, r-oldrel (arm64): CNprep_2.2.tgz, r-release (x86_64): CNprep_2.2.tgz, r-oldrel (x86_64): CNprep_2.2.tgz |
| Old sources: | CNprep archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.