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CovidMutations: Mutation Analysis Toolkit for COVID-19 (Coronavirus Disease
2019)
A feasible framework for mutation analysis and reverse transcription
polymerase chain reaction (RT-PCR) assay evaluation of COVID-19, including
mutation profile visualization, statistics and mutation ratio of each assay.
The mutation ratio is conducive to evaluating the coverage of RT-PCR assays in
large-sized samples. Mercatelli, D. and Giorgi, F. M. (2020)
<doi:10.20944/preprints202004.0529.v1>.
| Version: |
0.1.3 |
| Depends: |
R (≥ 3.6) |
| Imports: |
ggplot2, cowplot, seqinr, stringr, grDevices, graphics, utils, ggpubr, dplyr, VennDiagram |
| Suggests: |
testthat |
| Published: |
2020-09-18 |
| DOI: |
10.32614/CRAN.package.CovidMutations |
| Author: |
Shaoqian Ma  [aut,
cre],
Yongyou Zhang
[aut] |
| Maintainer: |
Shaoqian Ma <shaoqianma at qq.com> |
| BugReports: |
https://github.com/MSQ-123/CovidMutations/issues |
| License: |
Artistic-2.0 |
| URL: |
https://github.com/MSQ-123/CovidMutations |
| NeedsCompilation: |
no |
| Materials: |
README NEWS |
| In views: |
Epidemiology |
| CRAN checks: |
CovidMutations results |
Documentation:
Downloads:
Linking:
Please use the canonical form
https://CRAN.R-project.org/package=CovidMutations
to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.