The hardware and bandwidth for this mirror is donated by METANET, the Webhosting and Full Service-Cloud Provider.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]metanet.ch.

InfiniumPurify: Estimate and Account for Tumor Purity in Cancer Methylation Data Analysis

The proportion of cancer cells in solid tumor sample, known as the tumor purity, has adverse impact on a variety of data analyses if not properly accounted for. We develop 'InfiniumPurify', which is a comprehensive R package for estimating and accounting for tumor purity based on DNA methylation Infinium 450k array data. 'InfiniumPurify' provides functionalities for tumor purity estimation. In addition, it can perform differential methylation detection and tumor sample clustering with the consideration of tumor purities.

Version: 1.3.1
Depends: matrixStats
Published: 2017-01-14
DOI: 10.32614/CRAN.package.InfiniumPurify
Author: Yufang Qin
Maintainer: Yufang Qin <yfqin at shou.edu.cn>
License: GPL-2
NeedsCompilation: no
CRAN checks: InfiniumPurify results

Documentation:

Reference manual: InfiniumPurify.pdf

Downloads:

Package source: InfiniumPurify_1.3.1.tar.gz
Windows binaries: r-devel: InfiniumPurify_1.3.1.zip, r-release: InfiniumPurify_1.3.1.zip, r-oldrel: InfiniumPurify_1.3.1.zip
macOS binaries: r-release (arm64): InfiniumPurify_1.3.1.tgz, r-oldrel (arm64): InfiniumPurify_1.3.1.tgz, r-release (x86_64): InfiniumPurify_1.3.1.tgz, r-oldrel (x86_64): InfiniumPurify_1.3.1.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=InfiniumPurify to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.