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Allow to visualise data on the NCBI phylogenetic tree as presented in Lifemap <http://lifemap.univ-lyon1.fr/>. It takes as input a dataframe with at least a "taxid" column containing NCBI format TaxIds and allows to draw multiple layers with different visualisation tools.
| Version: | 1.1.4 |
| Depends: | R (≥ 3.5.0) |
| Imports: | leaflet, shiny, jsonlite, dplyr, tidyr, leaflet.minicharts, htmltools, rlang, RCurl, fastmatch |
| Suggests: | knitr |
| Published: | 2024-07-31 |
| DOI: | 10.32614/CRAN.package.LifemapR |
| Author: | Cassandra Bompard [aut], Damien M. de Vienne [aut], Aurélie Siberchicot [ctb, cre] |
| Maintainer: | Aurélie Siberchicot <aurelie.siberchicot at univ-lyon1.fr> |
| BugReports: | https://github.com/Lifemap-ToL/LifemapR/issues |
| License: | MIT + file LICENSE |
| URL: | https://lifemap-tol.github.io/LifemapR/, https://github.com/Lifemap-ToL/LifemapR |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | LifemapR results |
| Reference manual: | LifemapR.pdf |
| Vignettes: |
Use of LifemapR (source, R code) |
| Package source: | LifemapR_1.1.4.tar.gz |
| Windows binaries: | r-devel: LifemapR_1.1.4.zip, r-release: LifemapR_1.1.4.zip, r-oldrel: LifemapR_1.1.4.zip |
| macOS binaries: | r-release (arm64): LifemapR_1.1.4.tgz, r-oldrel (arm64): LifemapR_1.1.4.tgz, r-release (x86_64): LifemapR_1.1.4.tgz, r-oldrel (x86_64): LifemapR_1.1.4.tgz |
| Old sources: | LifemapR archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.