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A bioinformatics pipeline for performing taxonomic assignment of DNA metabarcoding sequence data while considering geographic location. A detailed tutorial is available at <https://urodelan.github.io/Local_Taxa_Tool_Tutorial/>. A manuscript describing these methods is in preparation.
Version: | 1.1.1 |
Imports: | utils, stats, taxize |
Published: | 2023-10-30 |
DOI: | 10.32614/CRAN.package.LocaTT |
Author: | Kenen Goodwin |
Maintainer: | Kenen Goodwin <urodelan at gmail.com> |
BugReports: | https://github.com/Urodelan/LocaTT/issues |
License: | GPL (≥ 3) |
URL: | https://github.com/Urodelan/LocaTT |
NeedsCompilation: | no |
Citation: | LocaTT citation info |
Materials: | README |
CRAN checks: | LocaTT results |
Reference manual: | LocaTT.pdf |
Package source: | LocaTT_1.1.1.tar.gz |
Windows binaries: | r-devel: LocaTT_1.1.1.zip, r-release: LocaTT_1.1.1.zip, r-oldrel: LocaTT_1.1.1.zip |
macOS binaries: | r-release (arm64): LocaTT_1.1.1.tgz, r-oldrel (arm64): LocaTT_1.1.1.tgz, r-release (x86_64): LocaTT_1.1.1.tgz, r-oldrel (x86_64): LocaTT_1.1.1.tgz |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.