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Contains the Markov cluster algorithm (MCL) for identifying clusters in networks and graphs. The algorithm simulates random walks on a (n x n) matrix as the adjacency matrix of a graph. It alternates an expansion step and an inflation step until an equilibrium state is reached.
| Version: | 1.0 |
| Depends: | R (≥ 2.10.0) |
| Imports: | expm |
| Published: | 2015-03-11 |
| DOI: | 10.32614/CRAN.package.MCL |
| Author: | Martin L. Jäger |
| Maintainer: | Ronja Foraita <foraita at bips.uni-bremen.de> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: | no |
| CRAN checks: | MCL results |
| Reference manual: | MCL.pdf |
| Package source: | MCL_1.0.tar.gz |
| Windows binaries: | r-devel: MCL_1.0.zip, r-release: MCL_1.0.zip, r-oldrel: MCL_1.0.zip |
| macOS binaries: | r-release (arm64): MCL_1.0.tgz, r-oldrel (arm64): MCL_1.0.tgz, r-release (x86_64): MCL_1.0.tgz, r-oldrel (x86_64): MCL_1.0.tgz |
| Reverse imports: | aPEAR, HPiP, mina, miRSM, miRspongeR, RITAN |
| Reverse suggests: | FCPS, simplifyEnrichment |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.