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A PC Algorithm with the Principle of Mendelian Randomization. This package implements the MRPC (PC with the principle of Mendelian randomization) algorithm to infer causal graphs. It also contains functions to simulate data under a certain topology, to visualize a graph in different ways, and to compare graphs and quantify the differences. See Badsha and Fu (2019) <doi:10.3389/fgene.2019.00460>,Badsha, Martin and Fu (2021) <doi:10.3389/fgene.2021.651812>.
| Version: | 3.1.0 |
| Depends: | R (≥ 4.0) |
| Imports: | bnlearn, compositions, dynamicTreeCut, GGally, fastcluster, gtools, graph, graphics, Hmisc, methods, mice, network, pcalg, psych, Rgraphviz, stats, sna, utils, WGCNA, plyr |
| Published: | 2022-04-11 |
| DOI: | 10.32614/CRAN.package.MRPC |
| Author: | Md Bahadur Badsha [aut,cre],Evan A Martin [ctb] and Audrey Qiuyan Fu [aut] |
| Maintainer: | Audrey Fu <audreyqyfu at gmail.com> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: | no |
| Materials: | README |
| In views: | CausalInference |
| CRAN checks: | MRPC results |
| Reference manual: | MRPC.pdf |
| Package source: | MRPC_3.1.0.tar.gz |
| Windows binaries: | r-devel: MRPC_3.1.0.zip, r-release: MRPC_3.1.0.zip, r-oldrel: MRPC_3.1.0.zip |
| macOS binaries: | r-release (arm64): MRPC_3.1.0.tgz, r-oldrel (arm64): MRPC_3.1.0.tgz, r-release (x86_64): MRPC_3.1.0.tgz, r-oldrel (x86_64): MRPC_3.1.0.tgz |
| Old sources: | MRPC archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.