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SCORPION: Single Cell Oriented Reconstruction of PANDA Individual
Optimized Networks
Constructs cell-type–specific gene regulatory networks from single-cell RNA-sequencing data. The method implements the SCORPION algorithm, which first aggregates individual cells into supercells and then applies PANDA (Passing Attributes between Networks for Data Assimilation) to infer transcription factor–target regulatory relationships. It also provides statistical methods for differential edge analysis.
| Version: |
1.3.1 |
| Depends: |
R (≥ 3.5.0) |
| Imports: |
cli, methods, irlba, igraph, RANN, Matrix, pbapply, dplyr |
| Suggests: |
RhpcBLASctl, testthat |
| Published: |
2026-02-12 |
| DOI: |
10.32614/CRAN.package.SCORPION |
| Author: |
Daniel Osorio 
[aut, cre],
Marieke L. Kuijjer
[aut] |
| Maintainer: |
Daniel Osorio <daniecos at uio.no> |
| BugReports: |
https://github.com/kuijjerlab/SCORPION/issues |
| License: |
GPL-3 |
| URL: |
https://github.com/kuijjerlab/SCORPION |
| NeedsCompilation: |
no |
| CRAN checks: |
SCORPION results |
Documentation:
Downloads:
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.