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TrumpetPlots: Visualization of Genetic Association Studies

Visualizes the relationship between allele frequency and effect size in genetic association studies. The input is a data frame containing association results. The output is a plot with the effect size of risk variants in the Y axis, and the allele frequency spectrum in the X axis. Corte et al (2023) <doi:10.1101/2023.04.21.23288923>.

Version: 0.0.1.1
Depends: R (≥ 2.10), data.table, ggplot2, magrittr, stats, purrr (≥ 1.0.1)
Published: 2023-06-13
DOI: 10.32614/CRAN.package.TrumpetPlots
Author: Judit García-González ORCID iD [aut, cre], Lathan Liou [ctb]
Maintainer: Judit García-González <judit.garciagonzalez at mssm.edu>
License: MIT + file LICENSE
NeedsCompilation: no
Materials: README
CRAN checks: TrumpetPlots results

Documentation:

Reference manual: TrumpetPlots.pdf

Downloads:

Package source: TrumpetPlots_0.0.1.1.tar.gz
Windows binaries: r-devel: TrumpetPlots_0.0.1.1.zip, r-release: TrumpetPlots_0.0.1.1.zip, r-oldrel: TrumpetPlots_0.0.1.1.zip
macOS binaries: r-release (arm64): TrumpetPlots_0.0.1.1.tgz, r-oldrel (arm64): TrumpetPlots_0.0.1.1.tgz, r-release (x86_64): TrumpetPlots_0.0.1.1.tgz, r-oldrel (x86_64): TrumpetPlots_0.0.1.1.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=TrumpetPlots to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.