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XSRecencyX: HIV Incidence Estimation using Recency Testing Data with Population Adjustment

Tools for estimating HIV incidence using cross-sectional recency testing data, adjusting for internal and external target populations and supporting subtype-specific parameters. The statistical methodology implemented builds on the framework described in Wang, Duerr, and Gao(2025) <doi:10.1002/sim.70216>.

Version: 0.1.0
Depends: R (≥ 4.0)
Imports: data.table, dplyr, geepack, purrr, magrittr, methods
Published: 2026-04-21
DOI: 10.32614/CRAN.package.XSRecencyX
Author: Sirong Li [aut], Fei Gao ORCID iD [aut, cre], Marlena Bannick ORCID iD [aut]
Maintainer: Fei Gao <fgao at fredhutch.org>
License: MIT + file LICENSE
NeedsCompilation: no
Materials: README
CRAN checks: XSRecencyX results

Documentation:

Reference manual: XSRecencyX.html , XSRecencyX.pdf

Downloads:

Package source: XSRecencyX_0.1.0.tar.gz
Windows binaries: r-release: XSRecencyX_0.1.0.zip, r-oldrel: XSRecencyX_0.1.0.zip
macOS binaries: r-release (arm64): XSRecencyX_0.1.0.tgz, r-oldrel (arm64): XSRecencyX_0.1.0.tgz, r-release (x86_64): XSRecencyX_0.1.0.tgz, r-oldrel (x86_64): XSRecencyX_0.1.0.tgz

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.