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A collection of measures for measuring ecological diversity. Ecological diversity comes in two flavors: alpha diversity measures the diversity within a single site or sample, and beta diversity measures the diversity across two sites or samples. This package overlaps considerably with other R packages such as 'vegan', 'gUniFrac', 'betapart', and 'fossil'. We also include a wide range of functions that are implemented in software outside the R ecosystem, such as 'scipy', 'Mothur', and 'scikit-bio'. The implementations here are designed to be basic and clear to the reader.
| Version: | 0.2.0 |
| Imports: | ape |
| Suggests: | testthat (≥ 2.1.0), vegan |
| Published: | 2020-01-20 |
| DOI: | 10.32614/CRAN.package.abdiv |
| Author: | Kyle Bittinger [aut, cre] |
| Maintainer: | Kyle Bittinger <kylebittinger at gmail.com> |
| BugReports: | https://github.com/kylebittinger/abdiv/issues |
| License: | MIT + file LICENSE |
| URL: | https://github.com/kylebittinger/abdiv |
| NeedsCompilation: | no |
| Materials: | README NEWS |
| CRAN checks: | abdiv results |
| Reference manual: | abdiv.pdf |
| Package source: | abdiv_0.2.0.tar.gz |
| Windows binaries: | r-devel: abdiv_0.2.0.zip, r-release: abdiv_0.2.0.zip, r-oldrel: abdiv_0.2.0.zip |
| macOS binaries: | r-release (arm64): abdiv_0.2.0.tgz, r-oldrel (arm64): abdiv_0.2.0.tgz, r-release (x86_64): abdiv_0.2.0.tgz, r-oldrel (x86_64): abdiv_0.2.0.tgz |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.