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afmToolkit: Functions for Atomic Force Microscope Force-Distance Curves Analysis

Set of functions for analyzing Atomic Force Microscope (AFM) force-distance curves. It allows to obtain the contact and unbinding points, perform the baseline correction, estimate the Young's modulus, fit up to two exponential decay function to a stress-relaxation / creep experiment, obtain adhesion energies. These operations can be done either over a single F-d curve or over a set of F-d curves in batch mode.

Version: 0.0.1
Depends: R (≥ 3.2.2), ggplot2
Imports: stats, utils, minpack.lm, grid, gridExtra, scales, dplyr, DBI, assertthat, tibble
Published: 2017-04-03
DOI: 10.32614/CRAN.package.afmToolkit
Author: Rafael Benitez, Vicente Jose Bolos, Jose-Luis Toca-Herrera
Maintainer: Rafael Benitez <rabesua at uv.es>
License: GPL-2 | GPL-3 [expanded from: GPL]
NeedsCompilation: no
Materials: README
CRAN checks: afmToolkit results

Documentation:

Reference manual: afmToolkit.pdf

Downloads:

Package source: afmToolkit_0.0.1.tar.gz
Windows binaries: r-devel: afmToolkit_0.0.1.zip, r-release: afmToolkit_0.0.1.zip, r-oldrel: afmToolkit_0.0.1.zip
macOS binaries: r-release (arm64): afmToolkit_0.0.1.tgz, r-oldrel (arm64): afmToolkit_0.0.1.tgz, r-release (x86_64): afmToolkit_0.0.1.tgz, r-oldrel (x86_64): afmToolkit_0.0.1.tgz

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.