bGMYC4: Bayesian General Mixed Yule-Coalescent Model for Species Delimitation
Implements a Bayesian version of the general mixed Yule-coalescent model for species delimitation. It uses Markov Chain Monte Carlo simulation to evaluate the posterior distribution of the model and supports flexible prior specification on model parameters.
| Version: | 4.1.6 |
| Depends: | R (≥ 4.0.0) |
| Imports: | ape (≥ 5.0), future, future.apply |
| Suggests: | mcmcse, plotly, base64enc, testthat (≥ 3.0.0), knitr, rmarkdown, htmltools, htmlwidgets, treeio, ggtree, dplyr |
| Published: | 2026-09-04 |
| DOI: | 10.32614/CRAN.package.bGMYC4 |
| Author: | Noah Reid [aut, cph] (Original author of bGMYC),
Dmitry Karabanov 
[aut, cre] |
| Maintainer: | Dmitry Karabanov <dk at ibiw.ru> |
| BugReports: | https://github.com/DmitryKarabanov/bGMYC4/issues |
| License: | GPL (≥ 3) |
| URL: | https://github.com/DmitryKarabanov/bGMYC4 |
| NeedsCompilation: | no |
| Citation: | bGMYC4 citation info |
| CRAN checks: | bGMYC4 results |
Documentation:
| Reference manual: | bGMYC4.html , bGMYC4.pdf |
| Vignettes: |
bGMYC4 Interactive Workflow (source, R code) bGMYC4: Package Overview (source, R code) |
Downloads:
| Package source: | bGMYC4_4.1.6.tar.gz |
| Windows binaries: | r-devel: bGMYC4_4.1.6.zip, r-release: bGMYC4_4.1.6.zip, r-oldrel: bGMYC4_4.1.6.zip |
| macOS binaries: | r-release (arm64): not available, r-oldrel (arm64): bGMYC4_4.1.6.tgz, r-release (x86_64): bGMYC4_4.1.6.tgz, r-oldrel (x86_64): bGMYC4_4.1.6.tgz |
Linking:
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