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BRIC-seq is a genome-wide approach for determining RNA stability in mammalian cells. This package provides a series of functions for performing quality check of your BRIC-seq data, calculation of RNA half-life for each transcript and comparison of RNA half-lives between two conditions.
| Version: | 0.1.0 |
| Depends: | R (≥ 3.3.1) |
| Imports: | data.table, ggplot2, shiny, shinydashboard, plotly, BSDA, outliers |
| Suggests: | testthat |
| Published: | 2016-12-05 |
| DOI: | 10.32614/CRAN.package.bridger2 |
| Author: | Naoto Imamachi [aut, cre] |
| Maintainer: | Naoto Imamachi <naoto.imamachi at gmail.com> |
| License: | MIT + file LICENSE |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | bridger2 results |
| Reference manual: | bridger2.pdf |
| Package source: | bridger2_0.1.0.tar.gz |
| Windows binaries: | r-devel: bridger2_0.1.0.zip, r-release: bridger2_0.1.0.zip, r-oldrel: bridger2_0.1.0.zip |
| macOS binaries: | r-release (arm64): bridger2_0.1.0.tgz, r-oldrel (arm64): bridger2_0.1.0.tgz, r-release (x86_64): bridger2_0.1.0.tgz, r-oldrel (x86_64): bridger2_0.1.0.tgz |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.