citcdf: Conditional Independence Testing with Cumulative Distribution Functions

Complex hypothesis testing through conditional cumulative distribution function estimation. Method is detailed in: Gauthier M, Agniel D, Thiébaut R & Hejblum BP (2021). "Distribution-free complex hypothesis testing for single-cell RNA-seq differential expression analysis", bioRxiv <doi:10.1101/2021.05.21.445165>.

Version:	1.1.0
Depends:	R (≥ 4.1)
Imports:	ggplot2, pbapply, parallel, patchwork, RcppNumerical, survey, viridisLite
Suggests:	BiocSet, bnlearn, GSA, knitr, quarto, reactable, rmarkdown, sessioninfo, SeuratObject, testthat (≥ 3.0.0)
Published:	2026-08-21
DOI:	10.32614/CRAN.package.citcdf
Author:	Denis Agniel [aut], Kalidou Ba [ctb], Sara Fallet [aut], Marine Gauthier [aut], Boris P. Hejblum [aut, cre, cph], Pierre Neuvial [ctb]
Maintainer:	Boris P. Hejblum <boris.hejblum at u-bordeaux.fr>
BugReports:	https://github.com/sistm/citcdf/issues
License:	GPL (≥ 3)
URL:	https://github.com/sistm/citcdf, https://sistm.github.io/citcdf/
NeedsCompilation:	no
Language:	en-US
Citation:	citcdf citation info
Materials:	README, NEWS
CRAN checks:	citcdf results

Documentation:

Reference manual:	citcdf.html , citcdf.pdf
Vignettes:	User guide to the citcdf R package (source, R code)

Downloads:

Package source:	citcdf_1.1.0.tar.gz
Windows binaries:	r-devel: citcdf_1.1.0.zip, r-release: citcdf_1.1.0.zip, r-oldrel: citcdf_1.1.0.zip
macOS binaries:	r-release (arm64): citcdf_1.1.0.tgz, r-oldrel (arm64): citcdf_1.1.0.tgz, r-release (x86_64): citcdf_1.1.0.tgz, r-oldrel (x86_64): citcdf_1.1.0.tgz

Linking:

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