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comorbidPGS: Assessing Predisposition Between Phenotypes using Polygenic Scores

Using polygenic scores (PGS, or PRS/GRS for binary outcomes), this package allows to investigate shared predisposition between different conditions, and do fast association analysis, export plots and views of the PGS distribution using 'ggplot2' object.

Version: 0.3.4
Depends: R (≥ 3.5.0)
Imports: ggplot2, stats, utils, MASS, nnet, parallel
Suggests: testthat (≥ 3.0.0)
Published: 2024-04-30
DOI: 10.32614/CRAN.package.comorbidPGS
Author: Vincent Pascat ORCID iD [aut, cre]
Maintainer: Vincent Pascat <vincent.pascat at univ-lille.fr>
License: GPL (≥ 3)
NeedsCompilation: no
Materials: README
CRAN checks: comorbidPGS results

Documentation:

Reference manual: comorbidPGS.pdf

Downloads:

Package source: comorbidPGS_0.3.4.tar.gz
Windows binaries: r-devel: comorbidPGS_0.3.4.zip, r-release: comorbidPGS_0.3.4.zip, r-oldrel: comorbidPGS_0.3.4.zip
macOS binaries: r-release (arm64): comorbidPGS_0.3.4.tgz, r-oldrel (arm64): comorbidPGS_0.3.4.tgz, r-release (x86_64): comorbidPGS_0.3.4.tgz, r-oldrel (x86_64): comorbidPGS_0.3.4.tgz

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.