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A data package with 2 main package variables: 'signature' and 'etiology'. The 'signature' variable contains the latest mutational signature profiles released on COSMIC <https://cancer.sanger.ac.uk/signatures/> for 3 mutation types: * Single base substitutions in the context of preceding and following bases, * Doublet base substitutions, and * Small insertions and deletions. The 'etiology' variable provides the known or hypothesized causes of signatures. 'cosmicsig' stands for COSMIC signatures. Please run ?'cosmicsig' for more information.
Version: | 1.1.1 |
Depends: | R (≥ 3.5) |
Suggests: | testthat (≥ 3.0.0), ICAMS, usethis |
Published: | 2023-08-30 |
DOI: | 10.32614/CRAN.package.cosmicsig |
Author: | Steven Rozen [aut, cre], Nanhai Jiang [aut] |
Maintainer: | Steven Rozen <steverozen at pm.me> |
BugReports: | https://github.com/Rozen-Lab/cosmicsig/issues |
License: | GPL-3 |
URL: | https://github.com/Rozen-Lab/cosmicsig |
NeedsCompilation: | no |
Language: | en-US |
Citation: | cosmicsig citation info |
Materials: | README NEWS |
CRAN checks: | cosmicsig results |
Reference manual: | cosmicsig.pdf |
Package source: | cosmicsig_1.1.1.tar.gz |
Windows binaries: | r-devel: cosmicsig_1.1.1.zip, r-release: cosmicsig_1.1.1.zip, r-oldrel: cosmicsig_1.1.1.zip |
macOS binaries: | r-release (arm64): cosmicsig_1.1.1.tgz, r-oldrel (arm64): cosmicsig_1.1.1.tgz, r-release (x86_64): cosmicsig_1.1.1.tgz, r-oldrel (x86_64): cosmicsig_1.1.1.tgz |
Old sources: | cosmicsig archive |
Reverse suggests: | mSigTools |
Please use the canonical form https://CRAN.R-project.org/package=cosmicsig to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.