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An implementation of Bayesian hierarchical models for faecal egg count data to assess anthelmintic efficacy. Bayesian inference is done via MCMC sampling using 'Stan' <https://mc-stan.org/>.
Version: | 2.4 |
Depends: | R (≥ 3.4.0), Rcpp (≥ 0.12.0) |
Imports: | methods, utils, rstan (≥ 2.26), rstantools (≥ 2.3.1), boot, coda, numbers, lattice, rootSolve |
LinkingTo: | rstan (≥ 2.26), Rcpp (≥ 1.0.7), BH (≥ 1.75.0), StanHeaders (≥ 2.26.0), RcppEigen (≥ 0.3.3.9.1), RcppParallel (≥ 5.1.4) |
Suggests: | eggCountsExtra, R.rsp, testthat |
Published: | 2023-10-14 |
DOI: | 10.32614/CRAN.package.eggCounts |
Author: | Craig Wang [aut, cre], Michaela Paul [aut], Tea Isler [ctb], Reinhard Furrer [ctb], Trustees of Columbia University [cph] (src/init.cpp, tools/make_cc.R, R/stanmodels.R) |
Maintainer: | Craig Wang <craigwang247 at gmail.com> |
License: | GPL (≥ 3) |
URL: | https://www.math.uzh.ch/pages/eggcount/ |
NeedsCompilation: | yes |
SystemRequirements: | GNU make |
Additional_repositories: | https://craigwangstat.github.io/eggCountsExtra-package/ |
Citation: | eggCounts citation info |
Materials: | NEWS |
CRAN checks: | eggCounts results |
Reference manual: | eggCounts.pdf |
Vignettes: |
eggCounts: a Bayesian hierarchical toolkit to model faecal egg count reductions |
Package source: | eggCounts_2.4.tar.gz |
Windows binaries: | r-devel: eggCounts_2.4.zip, r-release: eggCounts_2.4.zip, r-oldrel: eggCounts_2.4.zip |
macOS binaries: | r-release (arm64): eggCounts_2.4.tgz, r-oldrel (arm64): eggCounts_2.4.tgz, r-release (x86_64): eggCounts_2.4.tgz, r-oldrel (x86_64): eggCounts_2.4.tgz |
Old sources: | eggCounts archive |
Please use the canonical form https://CRAN.R-project.org/package=eggCounts to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.