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A method which uses the Cochran-Mantel-Haenszel test with significant pattern mining to detect intervals in binary genotype data which are significantly associated with a particular phenotype, while accounting for categorical covariates.
Version: | 0.2.7 |
Depends: | R (≥ 3.3.0), bindata |
Imports: | Rcpp |
LinkingTo: | Rcpp |
Suggests: | testthat |
Published: | 2016-09-13 |
DOI: | 10.32614/CRAN.package.fastcmh |
Author: | Felipe Llinares Lopez, Dean Bodenham |
Maintainer: | Dean Bodenham <deanbodenhambsse at gmail.com> |
License: | GPL-2 | GPL-3 |
NeedsCompilation: | yes |
SystemRequirements: | C++11 |
CRAN checks: | fastcmh results |
Reference manual: | fastcmh.pdf |
Package source: | fastcmh_0.2.7.tar.gz |
Windows binaries: | r-devel: fastcmh_0.2.7.zip, r-release: fastcmh_0.2.7.zip, r-oldrel: fastcmh_0.2.7.zip |
macOS binaries: | r-release (arm64): fastcmh_0.2.7.tgz, r-oldrel (arm64): fastcmh_0.2.7.tgz, r-release (x86_64): fastcmh_0.2.7.tgz, r-oldrel (x86_64): fastcmh_0.2.7.tgz |
Old sources: | fastcmh archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.