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Makes the Genepop software available in R. This software implements a mixture of traditional population genetic methods and some more focused developments: it computes exact tests for Hardy-Weinberg equilibrium, for population differentiation and for genotypic disequilibrium among pairs of loci; it computes estimates of F-statistics, null allele frequencies, allele size-based statistics for microsatellites, etc.; and it performs analyses of isolation by distance from pairwise comparisons of individuals or population samples.
Version: | 1.2.2 |
Imports: | Rcpp (≥ 0.12.10), stringr |
LinkingTo: | Rcpp, RcppProgress |
Suggests: | testthat, knitr, shiny |
Published: | 2023-01-19 |
DOI: | 10.32614/CRAN.package.genepop |
Author: | François Rousset [aut, cre, cph], Jimmy Lopez [ctb], Alexandre Genin [ctb], Khalid Belkhir [ctb] |
Maintainer: | François Rousset <francois.rousset at umontpellier.fr> |
License: | CeCILL-2 |
URL: | https://www.r-project.org, https://kimura.univ-montp2.fr/~rousset/Genepop.htm |
NeedsCompilation: | yes |
Citation: | genepop citation info |
Materials: | NEWS |
CRAN checks: | genepop results |
Reference manual: | genepop.pdf |
Package source: | genepop_1.2.2.tar.gz |
Windows binaries: | r-devel: genepop_1.2.2.zip, r-release: genepop_1.2.2.zip, r-oldrel: genepop_1.2.2.zip |
macOS binaries: | r-release (arm64): genepop_1.2.2.tgz, r-oldrel (arm64): genepop_1.2.2.tgz, r-release (x86_64): genepop_1.2.2.tgz, r-oldrel (x86_64): genepop_1.2.2.tgz |
Old sources: | genepop archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.