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Provides an interface to the 'Genular' database API (<https://genular.atomic-lab.org>), allowing efficient retrieval and integration of genomic, proteomic, and single-cell data. It supports operations like fetching gene annotations, cell expression profiles, and other information as defined in the 'Genular' database, enabling seamless incorporation of biological data into R workflows. With functions tailored for bioinformatics and machine learning, the package facilitates exploration of cellular heterogeneity, gene-disease relationships, and pathway analysis, streamlining multi-omics data analysis.
Version: | 1.0.1 |
Depends: | R (≥ 3.4.0) |
Imports: | httr, jsonlite, dplyr, tidyr, stats |
Suggests: | plyr, purrr, ggplot2 |
Published: | 2024-10-19 |
DOI: | 10.32614/CRAN.package.genular |
Author: | Ivan Tomic [aut, cre, cph], Adriana Tomic [aut, ctb, cph, fnd], Stephanie Hao [aut] |
Maintainer: | Ivan Tomic <info at ivantomic.com> |
BugReports: | https://github.com/atomiclaboratory/genular-database/issues |
License: | GPL-3 |
URL: | https://github.com/atomiclaboratory/genular-database, <https://genular.atomic-lab.org> |
NeedsCompilation: | no |
Materials: | README NEWS |
CRAN checks: | genular results [issues need fixing before 2024-12-04] |
Reference manual: | genular.pdf |
Package source: | genular_1.0.1.tar.gz |
Windows binaries: | r-devel: genular_1.0.1.zip, r-release: genular_1.0.1.zip, r-oldrel: genular_1.0.1.zip |
macOS binaries: | r-release (arm64): genular_1.0.1.tgz, r-oldrel (arm64): genular_1.0.1.tgz, r-release (x86_64): genular_1.0.1.tgz, r-oldrel (x86_64): genular_1.0.1.tgz |
Old sources: | genular archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.