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haploR: Query 'HaploReg', 'RegulomeDB'

A set of utilities for querying 'HaploReg' <https://pubs.broadinstitute.org/mammals/haploreg/haploreg.php>, 'RegulomeDB' <https://www.regulomedb.org/regulome-search/> web-based tools. The package connects to 'HaploReg', 'RegulomeDB' searches and downloads results, without opening web pages, directly from R environment. Results are stored in a data frame that can be directly used in various kinds of downstream analyses.

Version: 4.0.7
Depends: R (≥ 3.4.0)
Imports: httr, XML, tibble, RUnit, plyr, DT, RCurl, RJSONIO, methods
Suggests: knitr, rmarkdown, openxlsx
Published: 2023-10-09
DOI: 10.32614/CRAN.package.haploR
Author: Ilya Y. Zhbannikov [aut, cre], Konstantin G. Arbeev [aut], Anatoliy I. Yashin [aut]
Maintainer: Ilya Y. Zhbannikov <ilya.zhbannikov at duke.edu>
License: GPL-3
NeedsCompilation: no
Materials: README NEWS
CRAN checks: haploR results

Documentation:

Reference manual: haploR.pdf
Vignettes: Tutorial for haploR package

Downloads:

Package source: haploR_4.0.7.tar.gz
Windows binaries: r-devel: haploR_4.0.7.zip, r-release: haploR_4.0.7.zip, r-oldrel: haploR_4.0.7.zip
macOS binaries: r-release (arm64): haploR_4.0.7.tgz, r-oldrel (arm64): haploR_4.0.7.tgz, r-release (x86_64): haploR_4.0.7.tgz, r-oldrel (x86_64): haploR_4.0.7.tgz
Old sources: haploR archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=haploR to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.