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A set of utilities for querying 'HaploReg' <https://pubs.broadinstitute.org/mammals/haploreg/haploreg.php>, 'RegulomeDB' <https://www.regulomedb.org/regulome-search/> web-based tools. The package connects to 'HaploReg', 'RegulomeDB' searches and downloads results, without opening web pages, directly from R environment. Results are stored in a data frame that can be directly used in various kinds of downstream analyses.
| Version: | 4.0.7 |
| Depends: | R (≥ 3.4.0) |
| Imports: | httr, XML, tibble, RUnit, plyr, DT, RCurl, RJSONIO, methods |
| Suggests: | knitr, rmarkdown, openxlsx |
| Published: | 2023-10-09 |
| DOI: | 10.32614/CRAN.package.haploR |
| Author: | Ilya Y. Zhbannikov [aut, cre], Konstantin G. Arbeev [aut], Anatoliy I. Yashin [aut] |
| Maintainer: | Ilya Y. Zhbannikov <ilya.zhbannikov at duke.edu> |
| License: | GPL-3 |
| NeedsCompilation: | no |
| Materials: | README NEWS |
| CRAN checks: | haploR results |
| Reference manual: | haploR.pdf |
| Vignettes: |
Tutorial for haploR package |
| Package source: | haploR_4.0.7.tar.gz |
| Windows binaries: | r-devel: haploR_4.0.7.zip, r-release: haploR_4.0.7.zip, r-oldrel: haploR_4.0.7.zip |
| macOS binaries: | r-release (arm64): haploR_4.0.7.tgz, r-oldrel (arm64): haploR_4.0.7.tgz, r-release (x86_64): haploR_4.0.7.tgz, r-oldrel (x86_64): haploR_4.0.7.tgz |
| Old sources: | haploR archive |
Please use the canonical form https://CRAN.R-project.org/package=haploR to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.