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isopam: Clustering of Sites with Species Data
Clustering algorithm developed for use with plot inventories of species. It groups plots by subsets of diagnostic species rather than overall species composition. There is an unsupervised and a supervised mode, the latter accepting suggestions for species with greater weight and cluster medoids.
| Version: |
3.4 |
| Depends: |
R (≥ 3.5.0) |
| Imports: |
vegan, cluster, Rcpp, future, future.apply, methods, ps, grDevices, graphics, stats, utils, proxy, ggplot2, tibble |
| LinkingTo: |
Rcpp |
| Published: |
2026-02-22 |
| DOI: |
10.32614/CRAN.package.isopam |
| Author: |
Sebastian Schmidtlein
 [aut, cre],
Jason Collison [aut],
Robin Pfannendoerfer [aut],
Lubomir Tichy [ctb] |
| Maintainer: |
Sebastian Schmidtlein <schmidtlein at kit.edu> |
| License: |
GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| Copyright: |
see file COPYRIGHTS |
| NeedsCompilation: |
yes |
| Citation: |
isopam citation info |
| CRAN checks: |
isopam results [issues need fixing before 2026-03-09] |
Documentation:
Downloads:
Linking:
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https://CRAN.R-project.org/package=isopam
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.