The hardware and bandwidth for this mirror is donated by METANET, the Webhosting and Full Service-Cloud Provider.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]metanet.ch.

nfcore.utils: Utilities for 'nf-core' Modules

Provides utility functions to facilitate the use of R within nf-core modules. The package helps parse 'Nextflow' inputs and perform validation checks to ensure correct parameter handling and reproducible execution. For more details see Ewels (2020) <doi:10.1038/s41587-020-0439-x>.

Version: 0.0.4
Depends: R (≥ 4.4.0)
Imports: utils
Suggests: testthat (≥ 3.0.0), rmarkdown, BiocStyle, knitr, withr, yaml
Published: 2026-06-22
DOI: 10.32614/CRAN.package.nfcore.utils
Author: nf-core Community [aut], Louis Le Nezet ORCID iD [aut, cre, cph]
Maintainer: Louis Le Nezet <louislenezet at gmail.com>
BugReports: https://github.com/nf-core/r-nf-core-utils/issues
License: MIT + file LICENSE
URL: https://github.com/nf-core/r-nf-core-utils
NeedsCompilation: no
Citation: nfcore.utils citation info
Materials: README, NEWS
CRAN checks: nfcore.utils results

Documentation:

Reference manual: nfcore.utils.html , nfcore.utils.pdf
Vignettes: R nf-core utils tutorial (source, R code)

Downloads:

Package source: nfcore.utils_0.0.4.tar.gz
Windows binaries: r-devel: nfcore.utils_0.0.4.zip, r-release: not available, r-oldrel: nfcore.utils_0.0.4.zip
macOS binaries: r-release (arm64): nfcore.utils_0.0.4.tgz, r-oldrel (arm64): nfcore.utils_0.0.4.tgz, r-release (x86_64): nfcore.utils_0.0.4.tgz, r-oldrel (x86_64): nfcore.utils_0.0.4.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=nfcore.utils to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.