The hardware and bandwidth for this mirror is donated by METANET, the Webhosting and Full Service-Cloud Provider.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]metanet.ch.
Summarizes the taxonomic composition, diversity contribution of the rare and abundant community by using OTU (operational taxonomic unit) table which was generated by analyzing pipeline of 'QIIME' or 'mothur'. The rare biosphere in this package is subset by the relative abundance threshold (for details about rare biosphere please see Lynch and Neufeld (2015) <doi:10.1038/nrmicro3400>).
| Version: | 0.1.2 |
| Depends: | R (≥ 3.5.0) |
| Imports: | reshape2 (≥ 1.4) |
| Published: | 2023-09-05 |
| DOI: | 10.32614/CRAN.package.otuSummary |
| Author: | Sizhong Yang |
| Maintainer: | Sizhong Yang <yanglzu at 163.com> |
| License: | GPL (≥ 3) |
| URL: | https://github.com/cam315/otuSummary |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | otuSummary results |
| Reference manual: | otuSummary.pdf |
| Package source: | otuSummary_0.1.2.tar.gz |
| Windows binaries: | r-devel: otuSummary_0.1.2.zip, r-release: otuSummary_0.1.2.zip, r-oldrel: otuSummary_0.1.2.zip |
| macOS binaries: | r-release (arm64): otuSummary_0.1.2.tgz, r-oldrel (arm64): otuSummary_0.1.2.tgz, r-release (x86_64): otuSummary_0.1.2.tgz, r-oldrel (x86_64): otuSummary_0.1.2.tgz |
| Old sources: | otuSummary archive |
| Reverse imports: | stppSim |
Please use the canonical form https://CRAN.R-project.org/package=otuSummary to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.