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pbatR: Pedigree/Family-Based Genetic Association Tests Analysis and Power

This R package provides power calculations via internal simulation methods. The package also provides a frontend to the now abandoned PBAT program (developed by Christoph Lange), and reads in the corresponding output and displays results and figures when appropriate. The license of this R package itself is GPL. However, to have the program interact with the PBAT program for some functionality of the R package, users must additionally obtain the PBAT program from Christoph Lange, and accept his license. Both the data analysis and power calculations have command line and graphical interfaces using tcltk.

Version: 2.2-17
Depends: R (≥ 2.0.0)
Imports: survival, rootSolve
Suggests: kinship2, tcltk
Published: 2024-01-29
DOI: 10.32614/CRAN.package.pbatR
Author: Thomas Hoffmann, with contributions from Christoph Lange
Maintainer: Thomas Hoffmann <tjhoffm at gmail.com>
License: GPL-2 | GPL-3 [expanded from: GPL]
URL: https://academic.oup.com/bioinformatics/article-abstract/22/24/3103/208723
NeedsCompilation: yes
CRAN checks: pbatR results

Documentation:

Reference manual: pbatR.pdf

Downloads:

Package source: pbatR_2.2-17.tar.gz
Windows binaries: r-devel: pbatR_2.2-17.zip, r-release: pbatR_2.2-17.zip, r-oldrel: pbatR_2.2-17.zip
macOS binaries: r-release (arm64): pbatR_2.2-17.tgz, r-oldrel (arm64): pbatR_2.2-17.tgz, r-release (x86_64): pbatR_2.2-17.tgz, r-oldrel (x86_64): pbatR_2.2-17.tgz
Old sources: pbatR archive

Reverse dependencies:

Reverse depends: fbati

Linking:

Please use the canonical form https://CRAN.R-project.org/package=pbatR to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.