phylolm: Phylogenetic Linear Regression

Provides functions for fitting phylogenetic linear models and phylogenetic generalized linear models. The computation uses an algorithm that is linear in the number of tips in the tree. The package also provides functions for simulating continuous or binary traits along the tree. Other tools include functions to test the adequacy of a population tree.

Version:	2.6.5
Depends:	R (≥ 3.0), ape
Imports:	future.apply
Suggests:	testthat, nlme
Published:	2024-09-30
DOI:	10.32614/CRAN.package.phylolm
Author:	Lam Si Tung Ho [aut, cre], Cecile Ane [aut], Robert Lachlan [ctb], Kelsey Tarpinian [ctb], Rachel Feldman [ctb], Qing Yu [ctb], Wouter van der Bijl [ctb], Joan Maspons [ctb], Rutger Vos [ctb], Paul Bastide [ctb]
Maintainer:	Lam Si Tung Ho <lamho86 at gmail.com>
BugReports:	https://github.com/lamho86/phylolm/issues
License:	GPL-2 | GPL-3 | file LICENSE [expanded from: GPL (≥ 2) | file LICENSE]
URL:	https://github.com/lamho86/phylolm
NeedsCompilation:	yes
Citation:	phylolm citation info
Materials:	README
In views:	Phylogenetics
CRAN checks:	phylolm results

Documentation:

Reference manual:

phylolm.pdf

Downloads:

Package source:	phylolm_2.6.5.tar.gz
Windows binaries:	r-devel: phylolm_2.6.5.zip, r-release: phylolm_2.6.5.zip, r-oldrel: phylolm_2.6.5.zip
macOS binaries:	r-release (arm64): phylolm_2.6.5.tgz, r-oldrel (arm64): phylolm_2.6.5.tgz, r-release (x86_64): phylolm_2.6.5.tgz, r-oldrel (x86_64): phylolm_2.6.5.tgz
Old sources:	phylolm archive

Reverse dependencies:

Reverse depends:	phylolm.hp, sensiPhy
Reverse imports:	cauphy, compcodeR, dispRity, OUwie, phylopath, POMS, ratematrix, Rphylopars, rr2
Reverse suggests:	DHARMa, fuzzySim, marginaleffects, phylosem, phyr, RRphylo

Linking:

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