The hardware and bandwidth for this mirror is donated by METANET, the Webhosting and Full Service-Cloud Provider.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]metanet.ch.

Rphylopars: Phylogenetic Comparative Tools for Missing Data and Within-Species Variation

Tools for performing phylogenetic comparative methods for datasets with with multiple observations per species (intraspecific variation or measurement error) and/or missing data (Goolsby et al. 2017). Performs ancestral state reconstruction and missing data imputation on the estimated evolutionary model, which can be specified as Brownian Motion, Ornstein-Uhlenbeck, Early-Burst, Pagel's lambda, kappa, or delta, or a star phylogeny.

Version: 0.3.10
Depends: ape
Imports: Rcpp, doBy, phylolm, phytools, Matrix, MASS, numDeriv
LinkingTo: Rcpp, RcppArmadillo
Published: 2024-01-18
DOI: 10.32614/CRAN.package.Rphylopars
Author: Eric W. Goolsby [aut, cre], Jorn Bruggeman [aut], Cecile Ane [aut]
Maintainer: Eric W. Goolsby <eric.goolsby.evolution at gmail.com>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: https://github.com/ericgoolsby/Rphylopars/wiki
NeedsCompilation: yes
Materials: README
In views: MissingData, Phylogenetics
CRAN checks: Rphylopars results

Documentation:

Reference manual: Rphylopars.pdf

Downloads:

Package source: Rphylopars_0.3.10.tar.gz
Windows binaries: r-devel: Rphylopars_0.3.10.zip, r-release: Rphylopars_0.3.10.zip, r-oldrel: Rphylopars_0.3.10.zip
macOS binaries: r-release (arm64): Rphylopars_0.3.10.tgz, r-oldrel (arm64): Rphylopars_0.3.10.tgz, r-release (x86_64): Rphylopars_0.3.10.tgz, r-oldrel (x86_64): Rphylopars_0.3.10.tgz
Old sources: Rphylopars archive

Reverse dependencies:

Reverse suggests: phylosem, RRphylo

Linking:

Please use the canonical form https://CRAN.R-project.org/package=Rphylopars to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.