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Quality control of chromatin immunoprecipitation libraries (ChIP-seq) by quantitative polymerase chain reaction (qPCR). This function calculates Enrichment value with respect to reference for each histone modification (specific to 'Vii7' software <http://www.thermofisher.com/ca/en/home/life-science/pcr/real-time-pcr/real-time-pcr-instruments/viia-7-real-time-pcr-system/viia-7-software.html>). This function is applicable to full panel of histone modifications described by International Human Epigenomic Consortium (IHEC).
| Version: | 1.5 |
| Depends: | R (≥ 2.10) |
| Imports: | ggplot2 |
| Published: | 2018-02-08 |
| DOI: | 10.32614/CRAN.package.qcQpcr |
| Author: | Alireza Lorzadeh |
| Maintainer: | Alireza Lorzadeh <alorzadeh at bcgsc.ca> |
| License: | MIT + file LICENSE |
| NeedsCompilation: | no |
| CRAN checks: | qcQpcr results |
| Reference manual: | qcQpcr.pdf |
| Package source: | qcQpcr_1.5.tar.gz |
| Windows binaries: | r-devel: qcQpcr_1.5.zip, r-release: qcQpcr_1.5.zip, r-oldrel: qcQpcr_1.5.zip |
| macOS binaries: | r-release (arm64): qcQpcr_1.5.tgz, r-oldrel (arm64): qcQpcr_1.5.tgz, r-release (x86_64): qcQpcr_1.5.tgz, r-oldrel (x86_64): qcQpcr_1.5.tgz |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.