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rOCEAN: Two-Way Feature Set Testing for Multi-Omics

For any two way feature-set from a pair of pre-processed omics data, 3 different true discovery proportions (TDP), namely pairwise-TDP, column-TDP and row-TDP are calculated. Due to embedded closed testing procedure, the choice of feature-sets can be changed infinite times and even after seeing the data without any change in type I error rate. For more details refer to Ebrahimpoor et al., (2024) <doi:10.48550/arXiv.2410.19523>.

Version: 1.0
Imports: ff
Published: 2024-11-12
DOI: 10.32614/CRAN.package.rOCEAN
Author: Mitra Ebrahimpoor ORCID iD [aut, cre]
Maintainer: Mitra Ebrahimpoor <mitra.ebrahimpoor at gmail.com>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
Citation: rOCEAN citation info
Materials: README
CRAN checks: rOCEAN results

Documentation:

Reference manual: rOCEAN.pdf

Downloads:

Package source: rOCEAN_1.0.tar.gz
Windows binaries: r-devel: rOCEAN_1.0.zip, r-release: rOCEAN_1.0.zip, r-oldrel: rOCEAN_1.0.zip
macOS binaries: r-release (arm64): rOCEAN_1.0.tgz, r-oldrel (arm64): rOCEAN_1.0.tgz, r-release (x86_64): rOCEAN_1.0.tgz, r-oldrel (x86_64): rOCEAN_1.0.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=rOCEAN to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.