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A collection of useful functions and example code created and used by the Schloss Lab for reproducible microbiome research. Perform common tasks like read files created by mothur <https://mothur.org/>, tidy up your microbiome data, and format R Markdown documents for publication. See the website <http://www.schlosslab.org/schtools/> for more information, documentation, and examples.
Version: | 0.4.1 |
Imports: | dplyr, formatR, glue, rlang, stringr, tidyr |
Suggests: | covr, cowplot, ggplot2, ggtext, here, hexSticker, hrbrthemes, knitr, purrr, readr, rmarkdown, showtext, testthat |
Published: | 2023-08-21 |
DOI: | 10.32614/CRAN.package.schtools |
Author: | Kelly Sovacool [aut, cre], Nicholas Lesniak [aut], Sarah Lucas [aut], Courtney Armour [aut], Patrick Schloss [aut], Jacqueline Moltzau [ctb], Andrew Hannah [ctb], Nielson Baxter [ctb], Alyxandria Schubert [ctb], Kathryn Iverson [ctb] |
Maintainer: | Kelly Sovacool <sovacool at umich.edu> |
BugReports: | https://github.com/SchlossLab/schtools/issues |
License: | MIT + file LICENSE |
URL: | http://www.schlosslab.org/schtools/, https://github.com/SchlossLab/schtools |
NeedsCompilation: | no |
Citation: | schtools citation info |
Materials: | README NEWS |
CRAN checks: | schtools results |
Reference manual: | schtools.pdf |
Vignettes: |
Introduction to schtools |
Package source: | schtools_0.4.1.tar.gz |
Windows binaries: | r-devel: schtools_0.4.1.zip, r-release: schtools_0.4.1.zip, r-oldrel: schtools_0.4.1.zip |
macOS binaries: | r-release (arm64): schtools_0.4.1.tgz, r-oldrel (arm64): schtools_0.4.1.tgz, r-release (x86_64): schtools_0.4.1.tgz, r-oldrel (x86_64): schtools_0.4.1.tgz |
Old sources: | schtools archive |
Please use the canonical form https://CRAN.R-project.org/package=schtools to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.