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schtools: Schloss Lab Tools for Reproducible Microbiome Research

A collection of useful functions and example code created and used by the Schloss Lab for reproducible microbiome research. Perform common tasks like read files created by mothur <https://mothur.org/>, tidy up your microbiome data, and format R Markdown documents for publication. See the website <http://www.schlosslab.org/schtools/> for more information, documentation, and examples.

Version: 0.4.1
Imports: dplyr, formatR, glue, rlang, stringr, tidyr
Suggests: covr, cowplot, ggplot2, ggtext, here, hexSticker, hrbrthemes, knitr, purrr, readr, rmarkdown, showtext, testthat
Published: 2023-08-21
DOI: 10.32614/CRAN.package.schtools
Author: Kelly Sovacool ORCID iD [aut, cre], Nicholas Lesniak ORCID iD [aut], Sarah Lucas ORCID iD [aut], Courtney Armour ORCID iD [aut], Patrick Schloss [aut], Jacqueline Moltzau ORCID iD [ctb], Andrew Hannah [ctb], Nielson Baxter [ctb], Alyxandria Schubert [ctb], Kathryn Iverson [ctb]
Maintainer: Kelly Sovacool <sovacool at umich.edu>
BugReports: https://github.com/SchlossLab/schtools/issues
License: MIT + file LICENSE
URL: http://www.schlosslab.org/schtools/, https://github.com/SchlossLab/schtools
NeedsCompilation: no
Citation: schtools citation info
Materials: README NEWS
CRAN checks: schtools results

Documentation:

Reference manual: schtools.pdf
Vignettes: Introduction to schtools

Downloads:

Package source: schtools_0.4.1.tar.gz
Windows binaries: r-devel: schtools_0.4.1.zip, r-release: schtools_0.4.1.zip, r-oldrel: schtools_0.4.1.zip
macOS binaries: r-release (arm64): schtools_0.4.1.tgz, r-oldrel (arm64): schtools_0.4.1.tgz, r-release (x86_64): schtools_0.4.1.tgz, r-oldrel (x86_64): schtools_0.4.1.tgz
Old sources: schtools archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=schtools to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.