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tidyseurat: Brings Seurat to the Tidyverse

It creates an invisible layer that allow to see the 'Seurat' object as tibble and interact seamlessly with the tidyverse.

Version: 0.8.0
Depends: R (≥ 4.1.0), ttservice (≥ 0.3.8), SeuratObject
Imports: Seurat (≥ 4.3.0), tibble, dplyr, magrittr, tidyr (≥ 1.2.0), ggplot2, rlang, purrr, lifecycle, methods, plotly, tidyselect, utils, ellipsis, vctrs, pillar, stringr, cli, fansi, Matrix
Suggests: testthat, knitr, GGally, markdown, SingleR
Published: 2024-01-10
DOI: 10.32614/CRAN.package.tidyseurat
Author: Stefano Mangiola [aut, cre], Maria Doyle [ctb]
Maintainer: Stefano Mangiola <mangiolastefano at gmail.com>
BugReports: https://github.com/stemangiola/tidyseurat/issues
License: GPL-3
URL: https://github.com/stemangiola/tidyseurat
NeedsCompilation: no
Citation: tidyseurat citation info
Materials: README
CRAN checks: tidyseurat results

Documentation:

Reference manual: tidyseurat.pdf
Vignettes: Code for producing the figures in the article
Overview of the tidyseurat package

Downloads:

Package source: tidyseurat_0.8.0.tar.gz
Windows binaries: r-devel: tidyseurat_0.8.0.zip, r-release: tidyseurat_0.8.0.zip, r-oldrel: tidyseurat_0.8.0.zip
macOS binaries: r-release (arm64): tidyseurat_0.8.0.tgz, r-oldrel (arm64): tidyseurat_0.8.0.tgz, r-release (x86_64): tidyseurat_0.8.0.tgz, r-oldrel (x86_64): tidyseurat_0.8.0.tgz
Old sources: tidyseurat archive

Reverse dependencies:

Reverse imports: tidyomics
Reverse suggests: sccomp

Linking:

Please use the canonical form https://CRAN.R-project.org/package=tidyseurat to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.