CRAN Package Check Results for Maintainer ‘Caspar J van Lissa <c.j.vanlissa at tilburguniversity.edu>’

Last updated on 2025-02-16 10:51:11 CET.

Package	ERROR	NOTE	OK
bain			15
gorica			15
pema	1	7	7
theorytools			15
tidySEM		3	12
worcs			15

Package bain

Current CRAN status: OK: 15

Package gorica

Current CRAN status: OK: 15

Package pema

Current CRAN status: ERROR: 1, NOTE: 7, OK: 7

Version: 0.1.3
Check: for GNU extensions in Makefiles
Result: NOTE GNU make is a SystemRequirements. Flavors: r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 0.1.3
Check: installed package size
Result: NOTE installed size is 151.6Mb sub-directories of 1Mb or more: libs 150.6Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 0.1.3
Check: tests
Result: ERROR Running ‘testthat.R’ [16s/16s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(pema) > > test_check("pema") SAMPLING FOR MODEL 'lasso_MA' NOW (CHAIN 1). Chain 1: Chain 1: Gradient evaluation took 6.6e-05 seconds Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.66 seconds. Chain 1: Adjust your expectations accordingly! Chain 1: Chain 1: Chain 1: WARNING: No variance estimation is Chain 1: performed for num_warmup < 20 Chain 1: Chain 1: Iteration: 1 / 10 [ 10%] (Warmup) Chain 1: Iteration: 2 / 10 [ 20%] (Warmup) Chain 1: Iteration: 3 / 10 [ 30%] (Warmup) Chain 1: Iteration: 4 / 10 [ 40%] (Warmup) Chain 1: Iteration: 5 / 10 [ 50%] (Warmup) Chain 1: Iteration: 6 / 10 [ 60%] (Sampling) Chain 1: Iteration: 7 / 10 [ 70%] (Sampling) Chain 1: Iteration: 8 / 10 [ 80%] (Sampling) Chain 1: Iteration: 9 / 10 [ 90%] (Sampling) Chain 1: Iteration: 10 / 10 [100%] (Sampling) Chain 1: Chain 1: Elapsed Time: 0.011 seconds (Warm-up) Chain 1: 0 seconds (Sampling) Chain 1: 0.011 seconds (Total) Chain 1: SAMPLING FOR MODEL 'lasso_MA' NOW (CHAIN 2). Chain 2: Chain 2: Gradient evaluation took 3.6e-05 seconds Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0.36 seconds. Chain 2: Adjust your expectations accordingly! Chain 2: Chain 2: Chain 2: WARNING: No variance estimation is Chain 2: performed for num_warmup < 20 Chain 2: Chain 2: Iteration: 1 / 10 [ 10%] (Warmup) Chain 2: Iteration: 2 / 10 [ 20%] (Warmup) Chain 2: Iteration: 3 / 10 [ 30%] (Warmup) Chain 2: Iteration: 4 / 10 [ 40%] (Warmup) Chain 2: Iteration: 5 / 10 [ 50%] (Warmup) Chain 2: Iteration: 6 / 10 [ 60%] (Sampling) Chain 2: Iteration: 7 / 10 [ 70%] (Sampling) Chain 2: Iteration: 8 / 10 [ 80%] (Sampling) Chain 2: Iteration: 9 / 10 [ 90%] (Sampling) Chain 2: Iteration: 10 / 10 [100%] (Sampling) Chain 2: Chain 2: Elapsed Time: 0.013 seconds (Warm-up) Chain 2: 0 seconds (Sampling) Chain 2: 0.013 seconds (Total) Chain 2: SAMPLING FOR MODEL 'lasso_MA' NOW (CHAIN 3). Chain 3: Chain 3: Gradient evaluation took 3.5e-05 seconds Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 0.35 seconds. Chain 3: Adjust your expectations accordingly! Chain 3: Chain 3: Chain 3: WARNING: No variance estimation is Chain 3: performed for num_warmup < 20 Chain 3: Chain 3: Iteration: 1 / 10 [ 10%] (Warmup) Chain 3: Iteration: 2 / 10 [ 20%] (Warmup) Chain 3: Iteration: 3 / 10 [ 30%] (Warmup) Chain 3: Iteration: 4 / 10 [ 40%] (Warmup) Chain 3: Iteration: 5 / 10 [ 50%] (Warmup) Chain 3: Iteration: 6 / 10 [ 60%] (Sampling) Chain 3: Iteration: 7 / 10 [ 70%] (Sampling) Chain 3: Iteration: 8 / 10 [ 80%] (Sampling) Chain 3: Iteration: 9 / 10 [ 90%] (Sampling) Chain 3: Iteration: 10 / 10 [100%] (Sampling) Chain 3: Chain 3: Elapsed Time: 0.013 seconds (Warm-up) Chain 3: 0 seconds (Sampling) Chain 3: 0.013 seconds (Total) Chain 3: SAMPLING FOR MODEL 'lasso_MA' NOW (CHAIN 4). Chain 4: Chain 4: Gradient evaluation took 3.5e-05 seconds Chain 4: 1000 transitions using 10 leapfrog steps per transition would take 0.35 seconds. Chain 4: Adjust your expectations accordingly! Chain 4: Chain 4: Chain 4: WARNING: No variance estimation is Chain 4: performed for num_warmup < 20 Chain 4: Chain 4: Iteration: 1 / 10 [ 10%] (Warmup) Chain 4: Iteration: 2 / 10 [ 20%] (Warmup) Chain 4: Iteration: 3 / 10 [ 30%] (Warmup) Chain 4: Iteration: 4 / 10 [ 40%] (Warmup) Chain 4: Iteration: 5 / 10 [ 50%] (Warmup) Chain 4: Iteration: 6 / 10 [ 60%] (Sampling) Chain 4: Iteration: 7 / 10 [ 70%] (Sampling) Chain 4: Iteration: 8 / 10 [ 80%] (Sampling) Chain 4: Iteration: 9 / 10 [ 90%] (Sampling) Chain 4: Iteration: 10 / 10 [100%] (Sampling) Chain 4: Chain 4: Elapsed Time: 0.016 seconds (Warm-up) Chain 4: 0 seconds (Sampling) Chain 4: 0.016 seconds (Total) Chain 4: [ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-multiple_imp.R:8:1'): (code run outside of `test_that()`) ────── Error: package or namespace load failed for 'mice' in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]): there is no package called 'pan' Backtrace: ▆ 1. └─base::library(mice) at test-multiple_imp.R:8:1 2. └─base::tryCatch(...) 3. └─base (local) tryCatchList(expr, classes, parentenv, handlers) 4. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]]) 5. └─value[[3L]](cond) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ] Error: Test failures Execution halted Flavor: r-release-macos-arm64

Package theorytools

Current CRAN status: OK: 15

Package tidySEM

Current CRAN status: NOTE: 3, OK: 12

Version: 0.2.7
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: add_paths.Rd: lavaan mixture_starts.Rd: mxData Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Package worcs

Current CRAN status: OK: 15