CRAN Package Check Results for Maintainer ‘Vincent Dorie <vdorie at gmail.com>’

Last updated on 2025-03-11 14:56:00 CET.

Package	ERROR	NOTE	OK
bartCause			15
blme	2		13
dbarts		4	11
stan4bart	2	4	9

Package bartCause

Current CRAN status: OK: 15

Package blme

Current CRAN status: ERROR: 2, OK: 13

Version: 1.0-6
Check: tests
Result: ERROR Running ‘test-all.R’ [45s/114s] Running the tests in ‘tests/test-all.R’ failed. Complete output: > if (require(testthat, quietly = TRUE)) { + test_check("blme") + } else { + cat("package 'testthat' not available; cannot run unit tests\n") + } Loading required package: blme Loading required package: lme4 Loading required package: Matrix [ FAIL 2 | WARN 15 | SKIP 0 | PASS 109 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-06-lmm_resid.R:20:3'): blmer fits the eight schools example correctly ── eightSchools@theta not equal to 0. 1/1 mismatches [1] 1 - 0 == 1 ── Error ('test-07-lmm_fixef.R:120:3'): blmer fits sleep study example in documentation ── Error in `optwrap(optimizer, devfun, startingValues, lower = lowerBounds, control = control, adj = FALSE, verbose = verbose, ...)`: (converted from warning) convergence code -2 from nloptwrap: NLOPT_INVALID_ARGS: Invalid arguments (e.g. lower bounds are bigger than upper bounds, an unknown algorithm was specified, etcetera). Backtrace: ▆ 1. └─blme::blmer(...) at test-07-lmm_fixef.R:120:3 2. └─blme:::optimizeLmer(...) 3. └─lme4:::optwrap(...) [ FAIL 2 | WARN 15 | SKIP 0 | PASS 109 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.0-6
Check: tests
Result: ERROR Running ‘test-all.R’ [38s/47s] Running the tests in ‘tests/test-all.R’ failed. Complete output: > if (require(testthat, quietly = TRUE)) { + test_check("blme") + } else { + cat("package 'testthat' not available; cannot run unit tests\n") + } Loading required package: blme Loading required package: lme4 Loading required package: Matrix [ FAIL 2 | WARN 15 | SKIP 0 | PASS 109 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-06-lmm_resid.R:20:3'): blmer fits the eight schools example correctly ── eightSchools@theta not equal to 0. 1/1 mismatches [1] 1 - 0 == 1 ── Error ('test-07-lmm_fixef.R:120:3'): blmer fits sleep study example in documentation ── Error in `optwrap(optimizer, devfun, startingValues, lower = lowerBounds, control = control, adj = FALSE, verbose = verbose, ...)`: (converted from warning) convergence code -2 from nloptwrap: NLOPT_INVALID_ARGS: Invalid arguments (e.g. lower bounds are bigger than upper bounds, an unknown algorithm was specified, etcetera). Backtrace: ▆ 1. └─blme::blmer(...) at test-07-lmm_fixef.R:120:3 2. └─blme:::optimizeLmer(...) 3. └─lme4:::optwrap(...) [ FAIL 2 | WARN 15 | SKIP 0 | PASS 109 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Package dbarts

Current CRAN status: NOTE: 4, OK: 11

Version: 0.9-30
Check: top-level files
Result: NOTE possible bashism in configure.ac line 158 (should be 'b = a'): if test "$ac_cv_header_cstdint" == no; then Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Package stan4bart

Current CRAN status: ERROR: 2, NOTE: 4, OK: 9

Version: 0.0-10
Check: tests
Result: ERROR Running ‘testthat.R’ [16s/83s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > Sys.unsetenv("R_TESTS") > if (require(testthat, quietly = TRUE)) { + require(stan4bart) + test_check("stan4bart") + } else { + cat("package 'testthat' not available; cannot run unit tests\n") + } Loading required package: stan4bart Loading required package: dbarts [ FAIL 1 | WARN 0 | SKIP 4 | PASS 205 ] ══ Skipped tests (4) ═══════════════════════════════════════════════════════════ • On CRAN (4): 'test-01-continuous.R:124:3', 'test-01-continuous.R:163:3', 'test-02-binary.R:33:3', 'test-02-binary.R:128:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-01-continuous.R:277:3'): ppd has approximately right amount of noise ── ... <= 0.1 is not TRUE `actual`: FALSE `expected`: TRUE [ FAIL 1 | WARN 0 | SKIP 4 | PASS 205 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.0-10
Check: tests
Result: ERROR Running ‘testthat.R’ [18s/59s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > Sys.unsetenv("R_TESTS") > if (require(testthat, quietly = TRUE)) { + require(stan4bart) + test_check("stan4bart") + } else { + cat("package 'testthat' not available; cannot run unit tests\n") + } Loading required package: stan4bart Loading required package: dbarts [ FAIL 1 | WARN 0 | SKIP 4 | PASS 205 ] ══ Skipped tests (4) ═══════════════════════════════════════════════════════════ • On CRAN (4): 'test-01-continuous.R:124:3', 'test-01-continuous.R:163:3', 'test-02-binary.R:33:3', 'test-02-binary.R:128:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-01-continuous.R:277:3'): ppd has approximately right amount of noise ── ... <= 0.1 is not TRUE `actual`: FALSE `expected`: TRUE [ FAIL 1 | WARN 0 | SKIP 4 | PASS 205 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.0-10
Check: installed package size
Result: NOTE installed size is 49.9Mb sub-directories of 1Mb or more: libs 49.6Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64