The hardware and bandwidth for this mirror is donated by METANET, the Webhosting and Full Service-Cloud Provider.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]metanet.ch.
A simple R wrapper for the Java BiBit algorithm from "A biclustering algorithm for extracting bit-patterns from binary datasets" from Domingo et al. (2011) <doi:10.1093/bioinformatics/btr464>. An simple adaption for the BiBit algorithm which allows noise in the biclusters is also introduced as well as a function to guide the algorithm towards given (sub)patterns. Further, a workflow to derive noisy biclusters from discoverd larger column patterns is included as well.
| Version: | 0.3.1 |
| Imports: | stats, foreign, methods, utils, viridis, cluster, dendextend, lattice, grDevices, graphics, randomcoloR, biclust |
| Published: | 2017-06-30 |
| DOI: | 10.32614/CRAN.package.BiBitR |
| Author: | De Troyer Ewoud |
| Maintainer: | De Troyer Ewoud <ewoud.detroyer at uhasselt.be> |
| License: | GPL-3 |
| NeedsCompilation: | no |
| SystemRequirements: | Java |
| Materials: | README |
| CRAN checks: | BiBitR results |
| Reference manual: | BiBitR.pdf |
| Package source: | BiBitR_0.3.1.tar.gz |
| Windows binaries: | r-devel: BiBitR_0.3.1.zip, r-release: BiBitR_0.3.1.zip, r-oldrel: BiBitR_0.3.1.zip |
| macOS binaries: | r-release (arm64): BiBitR_0.3.1.tgz, r-oldrel (arm64): BiBitR_0.3.1.tgz, r-release (x86_64): BiBitR_0.3.1.tgz, r-oldrel (x86_64): BiBitR_0.3.1.tgz |
| Old sources: | BiBitR archive |
| Reverse depends: | RcmdrPlugin.BiclustGUI |
| Reverse imports: | miRSM |
Please use the canonical form https://CRAN.R-project.org/package=BiBitR to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.