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FuncDiv: Compute Contributional Diversity Metrics

Compute alpha and beta contributional diversity metrics, which is intended for linking taxonomic and functional microbiome data. See 'GitHub' repository for the tutorial: <https://github.com/gavinmdouglas/FuncDiv/wiki>. Citation: Gavin M. Douglas, Sunu Kim, Morgan G. I. Langille, B. Jesse Shapiro (2023) <doi:10.1093/bioinformatics/btac809>.

Version: 1.0.0
Depends: R (≥ 3.5.0)
Imports: ape, collapse, data.table, parallel, parallelDist, Rcpp, RcppParallel, RcppXPtrUtils, stats
LinkingTo: Rcpp, RcppArmadillo, RcppParallel
Suggests: testthat (≥ 3.0.0)
Published: 2023-03-08
DOI: 10.32614/CRAN.package.FuncDiv
Author: Gavin Douglas ORCID iD [aut, cre]
Maintainer: Gavin Douglas <gavinmdouglas at gmail.com>
License: AGPL-3
NeedsCompilation: yes
Citation: FuncDiv citation info
Materials: README
CRAN checks: FuncDiv results

Documentation:

Reference manual: FuncDiv.pdf

Downloads:

Package source: FuncDiv_1.0.0.tar.gz
Windows binaries: r-devel: FuncDiv_1.0.0.zip, r-release: FuncDiv_1.0.0.zip, r-oldrel: FuncDiv_1.0.0.zip
macOS binaries: r-release (arm64): FuncDiv_1.0.0.tgz, r-oldrel (arm64): FuncDiv_1.0.0.tgz, r-release (x86_64): FuncDiv_1.0.0.tgz, r-oldrel (x86_64): FuncDiv_1.0.0.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=FuncDiv to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.