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Estimate Gaussian graphical models with nonconvex penalties <doi:10.31234/osf.io/ad57p>, including the atan Wang and Zhu (2016) <doi:10.1155/2016/6495417>, seamless L0 Dicker, Huang, and Lin (2013) <doi:10.5705/ss.2011.074>, exponential Wang, Fan, and Zhu <doi:10.1007/s10463-016-0588-3>, smooth integration of counting and absolute deviation Lv and Fan (2009) <doi:10.1214/09-AOS683>, logarithm Mazumder, Friedman, and Hastie (2011) <doi:10.1198/jasa.2011.tm09738>, Lq, smoothly clipped absolute deviation Fan and Li (2001) <doi:10.1198/016214501753382273>, and minimax concave penalty Zhang (2010) <doi:10.1214/09-AOS729>. There are also extensions for computing variable inclusion probabilities, multiple regression coefficients, and statistical inference <doi:10.1214/15-EJS1031>.
| Version: | 2.1.1 |
| Depends: | R (≥ 4.0.0) |
| Imports: | Rcpp (≥ 1.0.4.6), Rdpack (≥ 0.11-1), reshape, GGally (≥ 1.4.0), ggplot2 (≥ 3.3.0), glassoFast (≥ 1.0), network (≥ 1.15), numDeriv (≥ 2016.8-1.1), mathjaxr (≥ 1.0-1), MASS (≥ 7.3-51.5), methods, parallel, pbapply, sna (≥ 2.5), stats, utils |
| LinkingTo: | Rcpp, RcppArmadillo |
| Suggests: | car, corpcor, corrplot, dplyr, NetworkToolbox, NetworkComparisonTest, nlshrink, rmarkdown, knitr |
| Published: | 2021-12-15 |
| DOI: | 10.32614/CRAN.package.GGMncv |
| Author: | Donald Williams [aut, cre] |
| Maintainer: | Donald Williams <drwwilliams at ucdavis.edu> |
| BugReports: | https://github.com/donaldRwilliams/GGMncv/issues |
| License: | GPL-2 |
| NeedsCompilation: | yes |
| Materials: | README |
| CRAN checks: | GGMncv results |
| Reference manual: | GGMncv.pdf |
| Vignettes: |
NCT: CPU Time High Dimensional Data: Must Read!! Custom Network Comparison Tests NCT: Null Distributions Positive Manifold (Sign Restriction) |
| Package source: | GGMncv_2.1.1.tar.gz |
| Windows binaries: | r-devel: GGMncv_2.1.1.zip, r-release: GGMncv_2.1.1.zip, r-oldrel: GGMncv_2.1.1.zip |
| macOS binaries: | r-release (arm64): GGMncv_2.1.1.tgz, r-oldrel (arm64): GGMncv_2.1.1.tgz, r-release (x86_64): GGMncv_2.1.1.tgz, r-oldrel (x86_64): GGMncv_2.1.1.tgz |
| Old sources: | GGMncv archive |
| Reverse imports: | GGMnonreg, IRCcheck |
| Reverse suggests: | bootnet |
Please use the canonical form https://CRAN.R-project.org/package=GGMncv to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.