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A set of tools to analyze and visualize the relationships between host-associated microbiomes of hybrid organisms and those of their progenitor species. Though not necessary, installing the microViz package is recommended as a check for phyloseq objects. To install microViz from R Universe use the following command: install.packages("microViz", repos = c(davidbarnett = "https://david-barnett.r-universe.dev", getOption("repos"))). To install microViz from GitHub use the following commands: install.packages("devtools") followed by devtools::install_github("david-barnett/microViz").
| Version: | 0.1.1 |
| Imports: | rgl, compositions, rlang, PERMANOVA, graphics, stats, vegan, ks, ape, geometry, StereoMorph, phyloseq |
| Suggests: | microViz |
| Published: | 2023-12-05 |
| DOI: | 10.32614/CRAN.package.HybridMicrobiomes |
| Author: | Benjamin Camper [aut], Zachary Lauglin [ctb], Daniel Malagon [ctb], Robert Denton [ctb], Sharon Bewick [aut, cre], National Science Foundation Division of Integrative Organismal Systems (award #2104605) [fnd], Clemson University Support for Early Exploration and Development (CU SEED) Grant [fnd] |
| Maintainer: | Sharon Bewick <sbewick at clemson.edu> |
| License: | GPL-2 |
| NeedsCompilation: | no |
| CRAN checks: | HybridMicrobiomes results |
| Reference manual: | HybridMicrobiomes.pdf |
| Package source: | HybridMicrobiomes_0.1.1.tar.gz |
| Windows binaries: | r-devel: HybridMicrobiomes_0.1.1.zip, r-release: HybridMicrobiomes_0.1.1.zip, r-oldrel: HybridMicrobiomes_0.1.1.zip |
| macOS binaries: | r-release (arm64): HybridMicrobiomes_0.1.1.tgz, r-oldrel (arm64): HybridMicrobiomes_0.1.1.tgz, r-release (x86_64): HybridMicrobiomes_0.1.1.tgz, r-oldrel (x86_64): HybridMicrobiomes_0.1.1.tgz |
| Old sources: | HybridMicrobiomes archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.