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Provides useful functions which are needed for bioinformatic analysis such as calculating linear principal components from numeric data and Single-nucleotide polymorphism (SNP) dataset, calculating fixation index (Fst) using Hudson method, creating scatter plots in 3 views, handling with PLINK binary file format, detecting rough structures and outliers using unsupervised clustering, and calculating matrix multiplication in the faster way for big data.
| Version: | 1.1.6 |
| Depends: | R (≥ 3.5.0) |
| Imports: | rARPACK, grDevices, graphics, stats, utils |
| Suggests: | testthat |
| Published: | 2021-01-21 |
| DOI: | 10.32614/CRAN.package.KRIS |
| Author: | Kridsadakorn Chaichoompu [aut, cre], Kristel Van Steen [aut], Fentaw Abegaz [aut], Sissades Tongsima [aut], Philip James Shaw [aut], Anavaj Sakuntabhai [aut], Luisa Pereira [aut] |
| Maintainer: | Kridsadakorn Chaichoompu <kridsadakorn at biostatgen.org> |
| BugReports: | https://gitlab.com/kris.ccp/kris/-/issues |
| License: | MIT + file LICENSE |
| URL: | https://gitlab.com/kris.ccp/kris |
| NeedsCompilation: | no |
| Citation: | KRIS citation info |
| Materials: | README NEWS |
| In views: | Omics |
| CRAN checks: | KRIS results |
| Reference manual: | KRIS.pdf |
| Package source: | KRIS_1.1.6.tar.gz |
| Windows binaries: | r-devel: KRIS_1.1.6.zip, r-release: KRIS_1.1.6.zip, r-oldrel: KRIS_1.1.6.zip |
| macOS binaries: | r-release (arm64): KRIS_1.1.6.tgz, r-oldrel (arm64): KRIS_1.1.6.tgz, r-release (x86_64): KRIS_1.1.6.tgz, r-oldrel (x86_64): KRIS_1.1.6.tgz |
| Old sources: | KRIS archive |
| Reverse imports: | FILEST, IPCAPS |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.