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LSPFP: Lysate and Secretome Peptide Feature Plotter

Creates plots of peptides from shotgun proteomics analysis of secretome and lysate samples. These plots contain associated protein features and scores for potential secretion and truncation.

Version: 1.0.3
Depends: seqinr, RCurl, data.table, bit64
Imports: R.utils, graphics, grDevices, stats, utils
Published: 2020-05-13
DOI: 10.32614/CRAN.package.LSPFP
Author: Rafael Dellen, with contributions of Fabian Kruse
Maintainer: Gereon Poschmann <gereon.poschmann at hhu.de>
License: GPL-3
NeedsCompilation: no
Materials: ChangeLog
In views: Omics
CRAN checks: LSPFP results

Documentation:

Reference manual: LSPFP.pdf

Downloads:

Package source: LSPFP_1.0.3.tar.gz
Windows binaries: r-devel: LSPFP_1.0.3.zip, r-release: LSPFP_1.0.3.zip, r-oldrel: LSPFP_1.0.3.zip
macOS binaries: r-release (arm64): LSPFP_1.0.3.tgz, r-oldrel (arm64): LSPFP_1.0.3.tgz, r-release (x86_64): LSPFP_1.0.3.tgz, r-oldrel (x86_64): LSPFP_1.0.3.tgz
Old sources: LSPFP archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.