OdysseusCharacterizationModule: Handy and Minimalistic Common Data Model Characterization

Extracts covariates from Observational Medical Outcomes Partnership (OMOP) Common Data Model (CDM) domains using an R-only pipeline. Supports configurable temporal windows, domain-specific covariates for drug exposure, drug era (including Anatomical Therapeutic Chemical (ATC) groupings), condition occurrence, condition era, concept sets and cohorts. Methods are based on the Observational Health Data Sciences and Informatics (OHDSI) framework described in Hripcsak et al. (2015) <doi:10.1038/sdata.2015.35> and "The Book of OHDSI" OHDSI (2019, ISBN:978-1-7923-0589-8).

Version:	0.0.1
Depends:	R (≥ 4.1.0)
Imports:	checkmate, DatabaseConnector, jsonlite, SqlRender, stats
Suggests:	Andromeda, Eunomia, FeatureExtraction, knitr, rmarkdown, testthat (≥ 3.0.0), withr
Published:	2026-04-22
DOI:	10.32614/CRAN.package.OdysseusCharacterizationModule
Author:	Alexander Alexeyuk [aut, cre]
Maintainer:	Alexander Alexeyuk <alexanderAlexeyuk at gmail.com>
License:	Apache License (≥ 2)
NeedsCompilation:	no
CRAN checks:	OdysseusCharacterizationModule results

Documentation:

Reference manual:	OdysseusCharacterizationModule.html , OdysseusCharacterizationModule.pdf
Vignettes:	Custom CovariateData Builder — Eunomia Demo (source, R code) OdysseusCharacterizationModule — Eunomia Walkthrough (source, R code)

Downloads:

Package source:	OdysseusCharacterizationModule_0.0.1.tar.gz
Windows binaries:	r-release: OdysseusCharacterizationModule_0.0.1.zip, r-oldrel: not available
macOS binaries:	r-release (arm64): OdysseusCharacterizationModule_0.0.1.tgz, r-oldrel (arm64): OdysseusCharacterizationModule_0.0.1.tgz, r-release (x86_64): OdysseusCharacterizationModule_0.0.1.tgz, r-oldrel (x86_64): OdysseusCharacterizationModule_0.0.1.tgz

Linking:

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