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brainGraph: Graph Theory Analysis of Brain MRI Data

A set of tools for performing graph theory analysis of brain MRI data. It works with data from a Freesurfer analysis (cortical thickness, volumes, local gyrification index, surface area), diffusion tensor tractography data (e.g., from FSL) and resting-state fMRI data (e.g., from DPABI). It contains a graphical user interface for graph visualization and data exploration, along with several functions for generating useful figures.

Version: 3.1.0
Depends: R (≥ 3.5.0), igraph (≥ 1.2.4)
Imports: abind, data.table (≥ 1.12.4), doParallel, foreach, grid, lattice, MASS, Matrix, methods, permute, parallel
Suggests: Hmisc, ade4, boot, car, expm, ggplot2, ggrepel, gridExtra, mediation, oro.nifti, scales
Published: 2024-04-04
DOI: 10.32614/CRAN.package.brainGraph
Author: Christopher G. Watson ORCID iD [aut, cre]
Maintainer: Christopher G. Watson <cgwatson at bu.edu>
BugReports: https://groups.google.com/forum/?hl=en#!forum/brainGraph-help
License: GPL-3
URL: https://github.com/cwatson/brainGraph
NeedsCompilation: no
Materials: NEWS
CRAN checks: brainGraph results

Documentation:

Reference manual: brainGraph.pdf

Downloads:

Package source: brainGraph_3.1.0.tar.gz
Windows binaries: r-devel: brainGraph_3.1.0.zip, r-release: brainGraph_3.1.0.zip, r-oldrel: brainGraph_3.1.0.zip
macOS binaries: r-release (arm64): brainGraph_3.1.0.tgz, r-oldrel (arm64): brainGraph_3.1.0.tgz, r-release (x86_64): brainGraph_3.1.0.tgz, r-oldrel (x86_64): brainGraph_3.1.0.tgz
Old sources: brainGraph archive

Reverse dependencies:

Reverse imports: etree, priorCON

Linking:

Please use the canonical form https://CRAN.R-project.org/package=brainGraph to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.