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An implementation of extended state-space SIR models developed by Song Lab at UM school of Public Health. There are several functions available by 1) including a time-varying transmission modifier, 2) adding a time-dependent quarantine compartment, 3) adding a time-dependent antibody-immunization compartment. Wang L. (2020) <doi:10.6339/JDS.202007_18(3).0003>.
| Version: | 0.4.2 |
| Depends: | R (≥ 3.5.2) |
| Imports: | coda (≥ 0.19.3), chron (≥ 2.3.54), data.table (≥ 1.12.0), ggplot2 (≥ 3.2.1), grDevices (≥ 3.5.2), graphics (≥ 3.5.2), gtools (≥ 3.8.1), scales (≥ 1.1.0), stats (≥ 3.5.2), reshape2 (≥ 1.4.3), rjags (≥ 4.10), utils (≥ 3.5.2) |
| Suggests: | testthat (≥ 3.0.0) |
| Published: | 2021-12-10 |
| DOI: | 10.32614/CRAN.package.eSIR |
| Author: | Lili Wang [aut], Song Lab [aut] (<http://websites.umich.edu/~songlab/>), Paul Egeler [ctb] (Spectrum Health Office of Research and Education), Michael Kleinsasser [cre] |
| Maintainer: | Michael Kleinsasser <biostat-cran-manager at umich.edu> |
| License: | CC BY 4.0 |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | eSIR results |
| Reference manual: | eSIR.pdf |
| Package source: | eSIR_0.4.2.tar.gz |
| Windows binaries: | r-devel: eSIR_0.4.2.zip, r-release: eSIR_0.4.2.zip, r-oldrel: eSIR_0.4.2.zip |
| macOS binaries: | r-release (arm64): eSIR_0.4.2.tgz, r-oldrel (arm64): eSIR_0.4.2.tgz, r-release (x86_64): eSIR_0.4.2.tgz, r-oldrel (x86_64): eSIR_0.4.2.tgz |
| Old sources: | eSIR archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.