The hardware and bandwidth for this mirror is donated by METANET, the Webhosting and Full Service-Cloud Provider.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]metanet.ch.

gaston: Genetic Data Handling (QC, GRM, LD, PCA) & Linear Mixed Models

Manipulation of genetic data (SNPs). Computation of GRM and dominance matrix, LD, heritability with efficient algorithms for linear mixed model (AIREML). Dandine et al <doi:10.1159/000488519>.

Version: 1.6
Depends: Rcpp, RcppParallel, methods
LinkingTo: Rcpp, RcppParallel, RcppEigen
Suggests: knitr, RcppEigen
Published: 2023-12-07
DOI: 10.32614/CRAN.package.gaston
Author: Hervé Perdry [cre, aut, cph], Claire Dandine-Roulland [aut, cph], Deepak Bandyopadhyay [cph] (C++ gzstream class), Lutz Kettner [cph] (C++ gzstream class)
Maintainer: Hervé Perdry <herve.perdry at universite-paris-saclay.fr>
License: GPL-3
NeedsCompilation: yes
Materials: NEWS
CRAN checks: gaston results

Documentation:

Reference manual: gaston.pdf
Vignettes: gaston faq
gaston package

Downloads:

Package source: gaston_1.6.tar.gz
Windows binaries: r-devel: gaston_1.6.zip, r-release: gaston_1.6.zip, r-oldrel: gaston_1.6.zip
macOS binaries: r-release (arm64): gaston_1.6.tgz, r-oldrel (arm64): gaston_1.6.tgz, r-release (x86_64): gaston_1.6.tgz, r-oldrel (x86_64): gaston_1.6.tgz
Old sources: gaston archive

Reverse dependencies:

Reverse depends: milorGWAS, Ravages
Reverse imports: hierfstat, RAINBOWR, rNeighborGWAS, rNeighborQTL, snpsettest
Reverse linking to: milorGWAS, Ravages
Reverse suggests: bigsnpr

Linking:

Please use the canonical form https://CRAN.R-project.org/package=gaston to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.