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Local structure in genomic data often induces dependence between observations taken at different genomic locations. Ignoring this dependence leads to underestimation of the standard error of parameter estimates. This package uses block bootstrapping to estimate asymptotically correct standard errors of parameters from any standard generalised linear model that may be fit by the glm() function.
| Version: | 1.0-1 |
| Depends: | R (≥ 3.2.2) |
| Imports: | data.table, magrittr, reshape, parallel |
| Suggests: | testthat |
| Published: | 2017-10-20 |
| DOI: | 10.32614/CRAN.package.genomic.autocorr |
| Author: | Chris Wallace [aut, cre], Oliver Burren [aut] |
| Maintainer: | Chris Wallace <cew54 at cam.ac.uk> |
| License: | GPL-2 |
| URL: | https://github.com/chr1swallace/genomic.autocorr |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | genomic.autocorr results |
| Reference manual: | genomic.autocorr.pdf |
| Package source: | genomic.autocorr_1.0-1.tar.gz |
| Windows binaries: | r-devel: genomic.autocorr_1.0-1.zip, r-release: genomic.autocorr_1.0-1.zip, r-oldrel: genomic.autocorr_1.0-1.zip |
| macOS binaries: | r-release (arm64): genomic.autocorr_1.0-1.tgz, r-oldrel (arm64): genomic.autocorr_1.0-1.tgz, r-release (x86_64): genomic.autocorr_1.0-1.tgz, r-oldrel (x86_64): genomic.autocorr_1.0-1.tgz |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.