mixIndependR: Genetics and Independence Testing of Mixed Genetic Panels

Developed to deal with multi-locus genotype data, this package is especially designed for those panel which include different type of markers. Basic genetic parameters like allele frequency, genotype frequency, heterozygosity and Hardy-Weinberg test of mixed genetic data can be obtained. In addition, a new test for mutual independence which is compatible for mixed genetic data is developed in this package.

Version:	1.0.0
Depends:	R (≥ 3.6.0)
Imports:	stats (≥ 3.3), utils (≥ 3.6.1), data.table
Suggests:	testthat, knitr, rmarkdown, ggplot2
Published:	2021-03-17
DOI:	10.32614/CRAN.package.mixIndependR
Author:	Bing Song
Maintainer:	Bing Song <bing.song at utsouthwestern.edu>
License:	GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL:	https://github.com/ice4prince/mixIndependR
NeedsCompilation:	no
Citation:	mixIndependR citation info
Materials:	README NEWS
CRAN checks:	mixIndependR results

Documentation:

Reference manual:	mixIndependR.pdf
Vignettes:	Basic Genetics Distribution Building and Comparison Hypothesis Test

Downloads:

Package source:	mixIndependR_1.0.0.tar.gz
Windows binaries:	r-devel: mixIndependR_1.0.0.zip, r-release: mixIndependR_1.0.0.zip, r-oldrel: mixIndependR_1.0.0.zip
macOS binaries:	r-release (arm64): mixIndependR_1.0.0.tgz, r-oldrel (arm64): mixIndependR_1.0.0.tgz, r-release (x86_64): mixIndependR_1.0.0.tgz, r-oldrel (x86_64): mixIndependR_1.0.0.tgz
Old sources:	mixIndependR archive

Linking:

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